TLmutation: Predicting the Effects of Mutations Using Transfer Learning

The Journal of Physical Chemistry B, 124(19): 3845-3854, 2020
Shamsi, Zahra and Chan, Matthew and Shukla, Diwakar
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How does evolution design functional free energy landscapes of proteins? A case study on the emergence of regulation in the Cyclin Dependent Kinase family

Molecular Systems Design & Engineering, 5(1): 392-400, 2020
Zahra Shamsi and Diwakar Shukla

FingerprintContacts: Predicting Alternative Conformations of Proteins from Coevolution

The Journal of Physical Chemistry B, 124(18): 3605-3615, 2020
Jiangyan Feng and Diwakar Shukla

Structural consequences of multisite phosphorylation in the BAK1 kinase domain

Biophysical journal, 118(3): 698-707, 2020
Moffett, Alexander S and Shukla, Diwakar
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Computational microscopy: Revealing molecular mechanisms in plants using molecular dynamics simulations

The Plant Cell, 31(12): tpc.119.tt1219, 2019
Feng, Jiangyan and Chen, Jiming and Selvam, Balaji and Shukla, Diwakar
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Molecular Mechanism of Brassinosteroid Perception by the Plant Growth Receptor BRI1

The Journal of Physical Chemistry B, 124(2): 355-365, 2019
Faisal Aldukhi and Aniket Deb and Chuankai Zhao and Alexander S. Moffett and Diwakar Shukla

Molecular Basis of the Activation and Dissociation of Dimeric PYL2 Receptor in Abscisic Acid Signaling

bioRxiv: 721761, 2019
Zhao, Chuankai and Shukla, Diwakar

Structural architecture of a dimeric class C GPCR based on co-trafficking of sweet taste receptor subunits

Journal of Biological Chemistry, 294(13): 4759-4774, 2019
Jihye Park and Balaji Selvam and Keisuke Sanematsu and Noriatsu Shigemura and Diwakar Shukla and Erik Procko

Ion Gel Dynamic Templates for Large Modulation of Morphology and Charge Transport Properties of Solution-Coated Conjugated Polymer Thin Films

ACS Applied Materials & Interfaces, 11(25): 22561-22574, 2019
Erfan Mohammadi and Chuankai Zhao and Fengjiao Zhang and Ge Qu and Seok-Heon Jung and Qiujie Zhao and Christopher M. Evans and Jin-Kyun Lee and Diwakar Shukla and Ying Diao

Dewetting Controls Plant Hormone Perception and Initiation of Drought Resistance Signaling

Structure, 27(4): 692-702, 2019
Shukla, Saurabh and Zhao, Chuankai and Shukla, Diwakar
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