Publications : Journal Article

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Machine learning guided design of high affinity ACE2 decoys for SARS-CoV-2 neutralization

Journal of Physical Chemistry B, In press, 2023
Matthew C. Chan, Kui K. Chan, Erik Procko and Diwakar Shukla
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Understanding Supramolecular Assembly of Supercharged Proteins

ACS Central Science, Volume 8, Issue 9, Pages 1350–1361, 2022.
Michael I. Jacobs, Prateek Bansal, Diwakar Shukla, and Charles M. Schroeder*
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Orthology‐based analysis helps map evolutionary diversification and predict substrate class use of BAHD acyltransferases

The Plant Journal, Volume 111, Issue 5, Pages 1453-1468, 2022.
Lars H Kruse, Austin T Weigle, Mohammad Irfan, Jesús Martínez‐Gómez, Jason D Chobirko, Jason E Schaffer, Alexandra A Bennett, Chelsea D Specht, Joseph M Jez, Diwakar Shukla, Gaurav D Moghe*
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Intriguing Role of Water in Plant Hormone Perception

bioRxiv, 2021
Chuankai Zhao, Diego E. Kleiman and Diwakar Shukla
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Deep Mutagenesis of a Transporter for Uptake of a Non-Native Substrate Identifies Conformationally Dynamic Regions

bioRxiv, 2021
Young, Heather J. and Chan, Matthew and Selvam, Balaji and Szymanski, Steven K. and Shukla, Diwakar and Procko, Erik
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Chiral emergence in multistep hierarchical assembly of achiral conjugated polymers.

Nature Communications, Volume 13, Article number 2738, 2022.
Kyung Sun Park, Zhengyuan Xue, Bijal B. Patel, Hyosung An, Justin J. Kwok, Prapti Kafle, Qian Chen, Diwakar Shukla, Ying Diao
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Recent Advances in Machine Learning Variant Effect Prediction Tools for Protein Engineering

Industrial & Engineering Chemistry Research, Volume 61, Issue 19, Pages 6235–6245, 2022.
Jesse R. Horne and Diwakar Shukla
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Structural Rearrangement of the Serotonin Transporter Intracellular Gate Induced by Thr276 Phosphorylation

ACS Chemical Neuroscience, In press, 2022.
Matthew C. Chan, Erik Procko, Diwakar Shukla
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Activation Mechanism of Strigolactone Receptors And Its Impact On Ligand Selectivity Between Host And Parasitic Plants

Journal of Chemical Information and Modeling, In press, 2022.
Chen, Jiming and Nelson, David C. and Shukla, Diwakar
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When SWEETs Turn Tweens: Updates and Perspectives

Annual Review of Plant Biology, Vol. 73, Issue 1, 2022
Xueyi Xue, Jiang Wang, Diwakar Shukla, Lily S. Cheung, and Li-Qing Chen
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