Publications : Journal Article

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Inhibition of lung microbiota-derived proapoptotic peptides ameliorates acute exacerbation of pulmonary fibrosis

Nature Communications, Volume 13, Article 1558, 2022.
Corina N. D’Alessandro-Gabazza, Taro Yasuma, Tetsu Kobayashi, Masaaki Toda, Ahmed M. Abdel-Hamid, Hajime Fujimoto, Osamu Hataji, Hiroki Nakahara, Atsuro Takeshita, Kota Nishihama, Tomohito Okano, Haruko Saiki, Yuko Okano, Atsushi Tomaru, Valeria Fridman D’Alessandro, Miyako Shiraishi, Akira Mizoguchi, Ryoichi Ono, Junpei Ohtsuka, Masayuki Fukumura, Tetsuya Nosaka, Xuenan Mi, Diwakar Shukla, Kensuke Kataoka, Yasuhiro Kondoh, Masaki Hirose, Toru Arai, Yoshikazu Inoue, Yutaka Yano, Roderick I. Mackie, Isaac Cann & Esteban C. Gabazza
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Engineered ACE2 decoy mitigates lung injury and death induced by SARS-CoV-2 variants.

Nature Chemical Biology, Volume 18, pages 342–351, 2022.
Lianghui Zhang, Soumajit Dutta, Shiqin Xiong, Matthew Chan, Kui K Chan, Timothy M Fan, Keith L Bailey, Matthew Lindeblad, Laura M Cooper, Lijun Rong, Anthony F Gugliuzza, Diwakar Shukla, Erik Procko, Jalees Rehman, Asrar B Malik
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Role of internal loop dynamics in antibiotic permeability of outer membrane porins

Proceedings of the National Academy of Sciences, Volume 119, Issue 8, Article e2117009119, 2022.
Archit Kumar Vasan, Nandan Haloi, Rebecca Joy Ulrich, Mary Elizabeth Metcalf, Po-Chao Wen, William W. Metcalf, Paul J. Hergenrother, Diwakar Shukla, Emad Tajkhorshid
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The Substrate Import Mechanism of the Human Serotonin Transporter

Biophysical Journal, Volume 121, Issue 5, Pages 715-730, 2022.
Chan, Matthew C Selvam, Balaji and Young, Heather J and Procko, Erik and Shukla, Diwakar
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Predicting the Activities of Drug Excipients on Biological Targets using One-Shot Learning

Journal of Physical Chemistry B, Volume 126, Issue 7, Pages 1492–1503, 2022.
Xuenan Mi and Diwakar Shukla
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Molecular Basis of the Activation and Dissociation of Dimeric PYL2 Receptor in Abscisic Acid Signaling

Physical Chemistry Chemical Physics, Volume 24, Page 724-734, 2022.
Zhao, Chuankai and Shukla, Diwakar
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Dual role of strigolactone receptor signaling partner in inhibiting substrate hydrolysis

Journal of Physical Chemistry B, Volume 126, Issue 11, Pages 2188–2195, 2022.
Briana L. Sobecks, Jiming Chen, Diwakar Shukla
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Distinct Binding Mechanisms for Allosteric Sodium Ion In Cannabinoid Receptors

ACS Chemical Neuroscience, Volume 13, Issue 3, Pages 379–389, 2022.
Dutta, Soumajit and Selvam, Balaji and Shukla, Diwakar
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Mechanistic origin of partial agonism of tetrahydrocannabinol for cannabinoid receptors

Journal of Biological Chemistry, Volume 298, Issue 4, Article 101764, 2022.
Dutta, Soumajit and Selvam, Balaji and Das, Aditi and Shukla, Diwakar
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Markov state modeling of membrane transport proteins.

Journal of Structural Biology, Volume 213, Issue 4, Article 107800, 2021.
Matthew C. Chan and Diwakar Shukla
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